Welcome to Yue Lab at Penn State
About the PI: Dr. Yue is a tenure-track assistant professor in the Dept. of Biochemistry and Molecular Biology at Penn State School of Medicine. He serves as the director of Bioinformatics division for the Penn State Institute for Personalized Medicine (IPM). He has been an active member of several NIH funded consortia, including the ENCODE, Roadmap/Epigenomics, and 4D Nucleome projects.
The main research area for Dr. Yue's group is cancer epigenomics and 3D genome organization. Before joining Penn State, Dr. Yue received his postdoctoral training in Dr. Bing Ren's laboratory at UCSD School of Medicine. Currently, he is a graduate advisor in the BMS program and the Genomics and Bioinformatics Program. Dr. Yue is passionate about science outreach and as the ENCODE outreach co-chair, he has organized many workshops in some of the most prestigious national and international conferences, including Keystone and ASHG annual meetings.
About the lab: Our lab was established in Oct. 2013 and we have both web lab and dry lab components. Right now, we have one Principal Investigator, one assistant professor, two postdoc fellows, five graduate students and one undergraduate student. People in the lab come from both biology and computer science background.
|1.||Impute high-resolution Hi-C from low-resolution Hi-C. paper on biorxiv|
|2.||Check out our 3D genome browser, where you can visualize chromatin interaction data such as Hi-C, ChIA-PET, Capture Hi-C, etc. paper on biorxiv|
|3.||Our recent work on Hi-C data reproducibility paper on biorxiv|
|4.||Labmember Jie Xu, Sriranga Iyyanki, and Lin An all passed their Ph.D. Candidacy Exam. Congratulations!|
|5.||We are a funded member of the newly founded 4D Nucleome consortium !|